Chapter 13: Software and Methods for Computational Flux Balance Analysis

Peter St. John; Yannick Bomble

doi:10.1007/978-1-0716-0195-2_13

Chapter 13: Software and Methods for Computational Flux Balance Analysis

Peter St. John
, Yannick Bomble

Biosciences Center

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

Abstract

As genetic engineering of organisms has grown easier and more precise, computational modeling of metabolic systems has played an increasingly important role in both guiding experimental interventions and in understanding the results of metabolic perturbations.

Original language	American English
Title of host publication	Metabolic Pathway Engineering
Subtitle of host publication	Methods in Molecular Biology, Volume 2096
Editors	M. E. Himmel, Y. J. Bomble
Publisher	Humana Press Inc.
Pages	165-177
Number of pages	13
DOIs	https://doi.org/10.1007/978-1-0716-0195-2_13 https://doi.org/10.1007/978-1-0716-0195-2_13
State	Published - 2020

Publication series

Name	Methods in Molecular Biology
Volume	2096
ISSN (Print)	1064-3745
ISSN (Electronic)	1940-6029

Bibliographical note

Publisher Copyright:
© Springer Science+Business Media, LLC, part of Springer Nature 2020.

NLR Publication Number

NREL/CH-2700-74954

Keywords

Computational Model
Constraint-based reconstruction and analysis
Flux Balance Analysis
Metabolic networks
Strain design

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St. John, P., & Bomble, Y. (2020). Chapter 13: Software and Methods for Computational Flux Balance Analysis. In M. E. Himmel, & Y. J. Bomble (Eds.), Metabolic Pathway Engineering: Methods in Molecular Biology, Volume 2096 (pp. 165-177). (Methods in Molecular Biology; Vol. 2096). Humana Press Inc.. https://doi.org/10.1007/978-1-0716-0195-2_13, https://doi.org/10.1007/978-1-0716-0195-2_13

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doi = "10.1007/978-1-0716-0195-2\_13",

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St. John, P & Bomble, Y 2020, Chapter 13: Software and Methods for Computational Flux Balance Analysis. in ME Himmel & YJ Bomble (eds), Metabolic Pathway Engineering: Methods in Molecular Biology, Volume 2096. Methods in Molecular Biology, vol. 2096, Humana Press Inc., pp. 165-177. https://doi.org/10.1007/978-1-0716-0195-2_13, https://doi.org/10.1007/978-1-0716-0195-2_13

Chapter 13: Software and Methods for Computational Flux Balance Analysis. / St. John, Peter; Bomble, Yannick.
Metabolic Pathway Engineering: Methods in Molecular Biology, Volume 2096. ed. / M. E. Himmel; Y. J. Bomble. Humana Press Inc., 2020. p. 165-177 (Methods in Molecular Biology; Vol. 2096).

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

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AU - Bomble, Yannick

N1 - Publisher Copyright: © Springer Science+Business Media, LLC, part of Springer Nature 2020.

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N2 - As genetic engineering of organisms has grown easier and more precise, computational modeling of metabolic systems has played an increasingly important role in both guiding experimental interventions and in understanding the results of metabolic perturbations.

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KW - Constraint-based reconstruction and analysis

KW - Flux Balance Analysis

KW - Metabolic networks

KW - Strain design

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AN - SCOPUS:85088812278

T3 - Methods in Molecular Biology

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PB - Humana Press Inc.

ER -

Chapter 13: Software and Methods for Computational Flux Balance Analysis

Abstract

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Bibliographical note

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Keywords

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