Overview
Personal Profile
Michael Guarnieri is a principal investigator in the Biocatalysis and C1 Conversion group at NLR's Biosciences Center. Michael is also a fellow of the Renewable and Sustainable Energy Institute and an affiliate faculty member in the Colorado School of Mines Departments of Chemistry and Chemical and Biological Engineering. Michael's research focuses on development of microbial biotechnologies with applications spanning the fields of bioenergy, bioremediation, and biosecurity. Michael leads a diverse bioenergy research project portfolio that includes the multi-institutional, U.S. Department of Energy (DOE) Biological and Environmental Research-supported IMAGINE Biosecurity Science Focus Area, which targets development of predictive microbial biocontainment designs via genome-scale engineering, phenomics, and computational modeling. Michael also leads DOE's Bioenergy Technologies Office-supported projects focused upon applied microbial metabolic engineering approaches for conversion of lignocellulosic and gaseous waste substrates (CH4, CO2, and CO) to sustainable fuel and chemical intermediates. Additionally, Michael leads the Algae Biotechnology Partnership and Photoreactive Carbon Capture initiatives at NLR, focused on development of high-throughput genetic engineering and phenomics tools and direct air capture technologies in microalgae.
Michael earned his Ph.D. from the Department of Biochemistry and Molecular Genetics at the University of Colorado School of Medicine, where his research focused on protein biochemistry and structure-guided drug design. Prior to his graduate studies, Michael earned a bachelor’s degree in chemistry at Rhode Island College while conducting undergraduate research at Brown University, examining viral secretion and virus–host interactions.
Research Interests
Molecular and Environmental Microbiology
Metabolic Engineering and Biocatalysis
Systems Biology and Genome-Scale Modeling
Biosecurity and Biocontainment
C1 Carbon (CO2, CH4, CO) and Photobiological Reactive Capture Technologies
Education/Academic Qualification
Bachelor, Chemistry, Rhode Island College
PhD, Biochemistry and Molecular Genetics, University of Colorado School of Medicine
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Collaborations and Top Research Areas From the Past 5 Years
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Digital Droplet PCR and Mesocosm-Based Methods to Evaluate Biocontainment Strategies in a Native Soil Ecosystem
Higgins, R., Arnolds, K., Lamb, N., Sebesta, J., Nyerges, A., Li, G., Linger, J. & Guarnieri, M., 2025, 1 p. National Laboratory of the Rockies (NLR).Research output: NLR › Poster
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Harnessing Heterologous Bacterial Two-Component Systems as Biosensors to Address Challenges in Fermentation Scale-Up
Johnson, C., Krishnan, A. & Guarnieri, M., 2025, 1 p. National Laboratory of the Rockies (NLR).Research output: NLR › Poster
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Secure Biosystems Design in Saccharomyces Cerevisiae Establishes Effective Biocontainment Strategies and Mechanisms of Escape
Lamb, N., Rosenbach, K., Musselwhite, T., Arnolds, K., Higgins, R., Li, G., Linger, J. & Guarnieri, M., 2025, In: Applied and Environmental Microbiology. 91, 9, 18 p.Research output: Contribution to journal › Article › peer-review
2 Scopus Citations -
Small Cells with Big Photosynthetic Productivities: Biotechnological Potential of the Picochlorum Genus
Krishnan, A., Dahlin, L., Guarnieri, M., Weissman, J. & Posewitz, M., 2025, In: Trends in Biotechnology. 43, 4, p. 759-772 14 p.Research output: Contribution to journal › Article › peer-review
5 Scopus Citations -
Cyanobacteria Newly Isolated from Marine Volcanic Seeps Display Rapid Sinking and Robust, High-Density Growth
Schubert, M., Tang, T.-C., Goodchild-Michelman, I., Ryon, K., Henriksen, J., Chavkin, T., Wu, Y., Miettinen, T., Van Wychen, S., Dahlin, L., Spatafora, D., Turco, G., Guarnieri, M., Manalis, S., Kowitz, J., Hann, E., Dhir, R., Quatrini, P., Mason, C. & Church, G. & 2 others, , 2024, In: Applied and Environmental Microbiology. 90, 11, 23 p.Research output: Contribution to journal › Article › peer-review
8 Scopus Citations